AC130710

Gene basic information

symbol GACAT3
name gastric cancer associated transcript 3 (non-protein coding)
location 2p24.3
alias_symbol lncRNA-AC130710
alias_name
Tissuestomach,
Cancergastric cancer,


Description

LncRNA AC130710 is up-regulated in gastric cancer, and associated with tumor size, TNM stages, distal metastasis and tissue CEA expression. It has one complementary binding site in the 3′-end with miR-129-5p, and thus could be suppressed by miR-129-5p expression (1).


Cancer related information

download as excel csv txt

LncRNA tissue cancer type expression level oncogene/suppress gene pathway binding gene/factor associated gene/factor proliferation apoptosis migration EMT invasion metastasis prognosis tag PMID
0 AC130710 stomach gastric cancer up / -miR-129-5p 24969565

Expression profile

adipose adrenal brain breast colon heart kidney leukocyte liver lung lymph node ovary prostate skeletal muscle testis thyroid tissue 0.0 0.1 0.2 0.3 0.4 0.5 fpkm 0.0 0.0 0.5 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 AC130710

Expression profile in human body map

TCGA-BLCA TCGA-BRCA TCGA-CESC TCGA-HNSC TCGA-KICH TCGA-KIRC TCGA-KIRP TCGA-LIHC TCGA-LUAD TCGA-LUSC TCGA-PRAD TCGA-STAD TCGA-THCA TCGA-UCEC tissue 0.00 0.01 0.02 0.03 0.04 0.05 0.06 fpkm AC130710 type normal tumor

Expression profile in TCGA


Genomic feature visualization


Sequence

External link



Literature

[1]. Xu C, Shao Y, Xia T, Yang Y, Dai J, et al. (2014). lncRNA-AC130710 targeting by miR-129-5p is upregulated in gastric cancer and associates with poor prognosis. Tumour Biol 35(10): 9701-6. link pubmed



© Bioinformatics Group of XTBG