GATA6-AS1

Gene basic information

symbol GATA6-AS1
name GATA6 antisense RNA 1 (head to head)
location 18q11.2
alias_symbol locus5689|BM742401
alias_name locus 5689
Tissuestomach,
Cancergastric cancer,


Description

LncRNA GATA6-AS1 is down-regulated in gastric cancer, and its down-regulation is associated with poor survival in gastric cancer patients. Ectopic overexpression of GATA6-AS1 inhibits metastasis-related phenotypes and decreases the concentration of extracellular MMP9 (1).


Cancer related information

download as excel csv txt

LncRNA tissue cancer type expression level oncogene/suppress gene pathway binding gene/factor associated gene/factor proliferation apoptosis migration EMT invasion metastasis prognosis tag PMID
0 GATA6-AS1 stomach gastric cancer down TS MMP9- - - 23846333

Expression profile

adipose adrenal brain breast colon heart kidney leukocyte liver lung lymph node ovary prostate skeletal muscle testis thyroid tissue 0 1 2 3 4 5 fpkm 0.1 0.8 0.0 0.1 0.5 5.0 0.4 0.0 0.5 2.0 2.0 2.0 2.0 0.0 0.3 0.1 GATA6-AS1

Expression profile in human body map

TCGA-BLCA TCGA-BRCA TCGA-CESC TCGA-HNSC TCGA-KICH TCGA-KIRC TCGA-KIRP TCGA-LIHC TCGA-LUAD TCGA-LUSC TCGA-PRAD TCGA-STAD TCGA-THCA TCGA-UCEC tissue 0.00 0.25 0.50 0.75 1.00 1.25 1.50 1.75 fpkm GATA6-AS1 type normal tumor

Expression profile in TCGA


Genomic feature visualization


Sequence

External link



Literature

[1]. Park SM, Park SJ, Kim HJ, Kwon OH, Kang TW, et al. (2013). A known expressed sequence tag, BM742401, is a potent lincRNA inhibiting cancer metastasis. Exp Mol Med 45: e31. link pubmed



© Bioinformatics Group of XTBG