HAR1A

Gene basic information

symbol HAR1A
name highly accelerated region 1A (non-protein coding)
location 20q13.33
alias_symbol HAR1F|NCRNA00064|LINC00064
alias_name human accelerated region 1, forward|non-protein coding RNA 64|long intergenic non-protein coding RNA 64
Tissuebreast,
Cancerbreast cancer,


Description

LncRNA HAR1A is up-regulated in breast cancer and its upregulation is associated with poor overall survival due to copy number alteration. Moreover, its upregulation can predict recurrence (1).


Cancer related information

download as excel csv txt

LncRNA tissue cancer type expression level oncogene/suppress gene pathway binding gene/factor associated gene/factor proliferation apoptosis migration EMT invasion metastasis prognosis tag PMID
0 HAR1A breast breast cancer up / - hormonal resistance 26942882

Expression profile

adipose adrenal brain breast colon heart kidney leukocyte liver lung lymph node ovary prostate skeletal muscle testis thyroid tissue 0.00 0.25 0.50 0.75 1.00 1.25 1.50 1.75 2.00 fpkm 0.2 0.2 2.0 0.1 0.3 0.0 0.0 1.0 0.1 0.2 0.3 0.2 0.6 0.1 0.4 0.3 HAR1A

Expression profile in human body map

TCGA-BLCA TCGA-BRCA TCGA-CESC TCGA-HNSC TCGA-KICH TCGA-KIRC TCGA-KIRP TCGA-LIHC TCGA-LUAD TCGA-LUSC TCGA-PRAD TCGA-STAD TCGA-THCA TCGA-UCEC tissue 0.0 0.1 0.2 0.3 0.4 0.5 0.6 fpkm HAR1A type normal tumor

Expression profile in TCGA


Genomic feature visualization


Sequence

External link



Literature

[1]. Liu H, Li J, Koirala P, Ding X, Chen B, et al. (2016). Long non-coding RNAs as prognostic markers in human breast cancer. Oncotarget 7(15): 20584-96. link pubmed



© Bioinformatics Group of XTBG