LINC00472

Gene basic information

symbol LINC00472
name long intergenic non-protein coding RNA 472
location 6q13
alias_symbol dJ288M22.3|FLJ13189
alias_name
Tissuebreast,
Cancerbreast cancer,


Description

LINC00472 is a tumor suppressor gene in breast cancer. It can inhibit cell proliferation and migration (1, 2).


Cancer related information

download as excel csv txt

LncRNA tissue cancer type expression level oncogene/suppress gene pathway binding gene/factor associated gene/factor proliferation apoptosis migration EMT invasion metastasis prognosis tag PMID
0 LINC00472 breast breast cancer down TS - - + chemotherapy and hormone resistance 25865225
1 LINC00472 breast breast cancer / TS 26564482

Expression profile

adipose adrenal brain breast colon heart kidney leukocyte liver lung lymph node ovary prostate skeletal muscle testis thyroid tissue 0 1 2 3 4 5 fpkm 0.2 0.3 0.3 0.5 0.1 0.8 2.0 0.0 0.1 0.5 0.3 0.1 0.3 0.0 0.4 5.0 LINC00472

Expression profile in human body map

TCGA-BLCA TCGA-BRCA TCGA-CESC TCGA-HNSC TCGA-KICH TCGA-KIRC TCGA-KIRP TCGA-LIHC TCGA-LUAD TCGA-LUSC TCGA-PRAD TCGA-STAD TCGA-THCA TCGA-UCEC tissue 0.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 fpkm LINC00472 type normal tumor

Expression profile in TCGA


Genomic feature visualization


Sequence

External link



Literature

[1]. Shen Y, Katsaros D, Loo LW, Hernandez BY, Chong C, et al. (2015). Prognostic and predictive values of long non-coding RNA LINC00472 in breast cancer. Oncotarget 6(11): 8579-92. link pubmed
[2]. Shen Y, Wang Z, Loo LW, Ni Y, Jia W, et al. (2015). LINC00472 expression is regulated by promoter methylation and associated with disease-free survival in patients with grade 2 breast cancer. Breast Cancer Res Treat 154(3): 473-82. link pubmed



© Bioinformatics Group of XTBG