LINC00654

Gene basic information

symbol LINC00654
name long intergenic non-protein coding RNA 654
location 20p12.3
alias_symbol
alias_name
Tissuebreast,
Cancerbreast cancer,


Description

LINC00654 is up-regulated in breast cancer and its expression level is associated with poor overall survival due to the copy number alteration (1).


Cancer related information

download as excel csv txt

LncRNA tissue cancer type expression level oncogene/suppress gene pathway binding gene/factor associated gene/factor proliferation apoptosis migration EMT invasion metastasis prognosis tag PMID
0 LINC00654 breast breast cancer up / - 26942882

Expression profile

adipose adrenal brain breast colon heart kidney leukocyte liver lung lymph node ovary prostate skeletal muscle testis thyroid tissue 0 1 2 3 4 5 fpkm 0.6 0.7 0.7 0.9 0.5 0.9 0.4 0.3 0.1 0.2 0.4 0.9 0.5 0.0 5.0 1.0 LINC00654

Expression profile in human body map

TCGA-BLCA TCGA-BRCA TCGA-CESC TCGA-HNSC TCGA-KICH TCGA-KIRC TCGA-KIRP TCGA-LIHC TCGA-LUAD TCGA-LUSC TCGA-PRAD TCGA-STAD TCGA-THCA TCGA-UCEC tissue 0.0 0.2 0.4 0.6 0.8 1.0 fpkm LINC00654 type normal tumor

Expression profile in TCGA


Genomic feature visualization


Sequence

External link



Literature

[1]. Liu H, Li J, Koirala P, Ding X, Chen B, et al. (2016). Long non-coding RNAs as prognostic markers in human breast cancer. Oncotarget 7(15): 20584-96. link pubmed



© Bioinformatics Group of XTBG