LINC01016

Gene basic information

symbol LINC01016
name long intergenic non-protein coding RNA 1016
location 6p21.31
alias_symbol
alias_name
Tissuebreast,
Cancerbreast cancer,


Description

LINC01016 is up-regulated in breast cancer and is up-regulated by E2. In addition, LINC01016 is direct transcriptional targets of ERα, correlated with ERα expression in clinical samples, and shows prognostic significance in relation to breast cancer survival (1).


Cancer related information

download as excel csv txt

LncRNA tissue cancer type expression level oncogene/suppress gene pathway binding gene/factor associated gene/factor proliferation apoptosis migration EMT invasion metastasis prognosis tag PMID
0 LINC01016 breast breast cancer up onco ER - 26426411

Expression profile

adipose adrenal brain breast colon heart kidney leukocyte liver lung lymph node ovary prostate skeletal muscle testis thyroid tissue 0 1 2 3 4 5 6 7 8 fpkm 0.1 0.3 0.3 0.2 0.2 0.1 0.1 0.1 0.0 0.1 0.2 0.3 0.1 0.2 8.0 0.1 LINC01016

Expression profile in human body map

TCGA-BLCA TCGA-BRCA TCGA-CESC TCGA-HNSC TCGA-KICH TCGA-KIRC TCGA-KIRP TCGA-LIHC TCGA-LUAD TCGA-LUSC TCGA-PRAD TCGA-STAD TCGA-THCA TCGA-UCEC tissue 0.0 0.2 0.4 0.6 0.8 1.0 1.2 fpkm LINC01016 type normal tumor

Expression profile in TCGA


Genomic feature visualization


Sequence

External link



Literature

[1]. Jonsson P, Coarfa C, Mesmar F, Raz T, Rajapakshe K, et al. (2015). Single-Molecule Sequencing Reveals Estrogen-Regulated Clinically Relevant lncRNAs in Breast Cancer. Mol Endocrinol 29(11): 1634-45. link pubmed



© Bioinformatics Group of XTBG