ncRAN

Gene basic information

symbol SNHG16
name small nucleolar RNA host gene 16
location 17q25.1
alias_symbol ncRAN|Nbla12061|Nbla10727
alias_name non-coding RNA expressed in aggressive neuroblastoma
Tissuebladder,colorectum,
Cancerbladder cancer,colorectal cancer,


Description

LncRNA ncRAN is higher in bladder cancer (1) and lower in colorectal cancer (2). It can regulate cancer cell proliferation, migration, and invasion.


Cancer related information

download as excel csv txt

LncRNA tissue cancer type expression level oncogene/suppress gene pathway binding gene/factor associated gene/factor proliferation apoptosis migration EMT invasion metastasis prognosis tag PMID
0 ncRAN bladder bladder cancer up onco + + + chemotherapy resistance 21147498
1 ncRAN colorectum colorectal cancer down TS - - + 24519959

Expression profile

adipose adrenal brain breast colon heart kidney leukocyte liver lung lymph node ovary prostate skeletal muscle testis thyroid tissue 0 5 10 15 20 fpkm 12.0 7.0 2.0 7.0 7.0 7.0 3.0 5.0 4.0 11.0 6.0 12.0 7.0 22.0 6.0 8.0 ncRAN

Expression profile in human body map

TCGA-BLCA TCGA-BRCA TCGA-CESC TCGA-HNSC TCGA-KICH TCGA-KIRC TCGA-KIRP TCGA-LIHC TCGA-LUAD TCGA-LUSC TCGA-PRAD TCGA-STAD TCGA-THCA TCGA-UCEC tissue 0 2 4 6 8 10 fpkm ncRAN type normal tumor

Expression profile in TCGA


Genomic feature visualization


Sequence

External link



Literature

[1]. Zhu Y, Yu M, Li Z, Kong C, Bi J, et al. (2011). ncRAN, a newly identified long noncoding RNA, enhances human bladder tumor growth, invasion, and survival. Urology 77(2): 510.e1-5. link pubmed
[2]. Qi P, Xu MD, Ni SJ, Shen XH, Wei P, et al. (2015). Down-regulation of ncRAN, a long non-coding RNA, contributes to colorectal cancer cell migration and invasion and predicts poor overall survival for colorectal cancer patients. Mol Carcinog 54(9): 742-50. link pubmed



© Bioinformatics Group of XTBG